Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948426.1_cds_XP_016489705.1_80201
CDS Infomation

[gene=LOC107809561] [db_xref=GeneID:107809561] [protein=AAA-ATPase At3g28610-like] [protein_id=XP_016489705.1] [location=48284..49783] [gbkey=CDS]
Sequence

ATGGGAACTATATCATTGACTGAATTAGGCTCTAAGCTAGCTGGACTGATGTTCATTTGG
GGCACAATTCAACAATTCTTCCCCTATACACTCCGCAAACGCATCAAATCATTTTGGCAG
AAATTTGAAAATTACTTCTACCCTTATGTTCAAATTACTATTGATGAATTCACCAATGGT
AAAAGCAACGATATCTACACTCAGGTCCACTCTTATTTGGGTACTAAGTCAATCAACAAG
GATGCTAAGTATCTCAAAGCTGAAAAGTCAAAGAACAGTAAGTCTTTTGCTGTTAGTTTA
GATGAAGGAGAAGAGATTATTGATCAATTCCTTGGAGCTAAACTCTCTTGGCGCTTTTAC
AAAGAAACATTCAATGAAAATTCTACGGGGCGCAATAATTCACGTCCAATTGAAAAGAAA
AGTTACACTATAACTTTCAATCAACGATATAAAGAAATGGTCATTGGAAAATACTTGAAG
CATGTGATGGAAGAAGGCAAGGTTATTGAGTTTAACAATAGGAAACAAAAGATTTACACC
AACAATTGTAGTGAGGATTGGTATTGGTATGATAAGGGTATGTGGAGGGACATTAATTTT
GAACATCCTGCAACTTTTGATACTTTAGCTATGGACCCTAAGAAGAAGGAGGAAATAGTT
ATCGATCTCGTTGCTTTTAGCAAAGGGAAGGACTATTATTCTAAAGTTGGTAAAGCTTGG
AAGCGCGGCTATCTTCTTTATGGTCCGCCAGGGACAGGAAAATCAACTATGATTGCAGCT
ATTGCGAACTTCTTGAATTATGATATTTATGATCTTGAGCTCACCTCTGTTAAGGATAAC
TCGGGGCTTAAGAAGTTGCTGATGGAAACAACAAGCAAGTCTATTATTGTAATTGAAGAC
ATTGATTGCTCTATTGATCTCACTGGCAAGAGAAAGAAGAAAAAGAAAAAGAATGAGGAA
ACAGTCAACGAAGATCAGGAAGATGACTCGGACTTGTCTAAAGAAAAAGCAAGTGAAAAT
AAGGAAACTGGCAAACTTACACTTTCAGGACTGTTGAACTTCATTGATGGAATATGGTCA
GCTTGTGGTCAAGAGAGGATCATTATATTTACAACCAATCATAAGGATAAACTTGATCCA
GCTCTTATACGTCGAGGACGGATGGATATGCACATTGAGATGTCGTATTGCAAATATGAA
GCATTTAAAGTGTTGGCTAAGAATTACTTGGATATTGAAACACACCCTCTGTTCCAACAA
ATTCAAAGTTTATTCGAGGAAGTAAACATAAGTCCTTGTGATGTGGCTGAGAATTTAATG
CTGAAAAATGCTTCAGGAGGGCCTGAGATTTGCTTGAATAACTTAATTCAAGCTCTGGAA
AAGGCAAAGGAAAAGGCCAATAAAGATAAAGAAGACAAGGAAAAAACCAGCTTGAATTCC
AAGAACATCAAAAAGTTTTCCACAAAATTGGTTGGCCGTCTAAAAAAGTTGTTGAAATGA

Peptide Sequence

PEP ID

XP_016489705.1
PEP Infomation

PREDICTED: AAA-ATPase At3g28610-like [Nicotiana tabacum]
Sequence

MGTISLTELGSKLAGLMFIWGTIQQFFPYTLRKRIKSFWQKFENYFYPYVQITIDEFTNG
KSNDIYTQVHSYLGTKSINKDAKYLKAEKSKNSKSFAVSLDEGEEIIDQFLGAKLSWRFY
KETFNENSTGRNNSRPIEKKSYTITFNQRYKEMVIGKYLKHVMEEGKVIEFNNRKQKIYT
NNCSEDWYWYDKGMWRDINFEHPATFDTLAMDPKKKEEIVIDLVAFSKGKDYYSKVGKAW
KRGYLLYGPPGTGKSTMIAAIANFLNYDIYDLELTSVKDNSGLKKLLMETTSKSIIVIED
IDCSIDLTGKRKKKKKKNEETVNEDQEDDSDLSKEKASENKETGKLTLSGLLNFIDGIWS
ACGQERIIIFTTNHKDKLDPALIRRGRMDMHIEMSYCKYEAFKVLAKNYLDIETHPLFQQ
IQSLFEEVNISPCDVAENLMLKNASGGPEICLNNLIQALEKAKEKANKDKEDKEKTSLNS
KNIKKFSTKLVGRLKKLLK

Transcript Sequence

Gene sequence data has not been registered.